Package: TMBhelper 1.4.0
TMBhelper: Package for basic helper functions that are not worth putting in a specialized contributed package
Basic functions as suggested and contributed by users and not worth making a specific contributed R package
Authors:
TMBhelper_1.4.0.tar.gz
TMBhelper_1.4.0.zip(r-4.5)TMBhelper_1.4.0.zip(r-4.4)TMBhelper_1.4.0.zip(r-4.3)
TMBhelper_1.4.0.tgz(r-4.4-any)TMBhelper_1.4.0.tgz(r-4.3-any)
TMBhelper_1.4.0.tar.gz(r-4.5-noble)TMBhelper_1.4.0.tar.gz(r-4.4-noble)
TMBhelper_1.4.0.tgz(r-4.4-emscripten)TMBhelper_1.4.0.tgz(r-4.3-emscripten)
TMBhelper.pdf |TMBhelper.html✨
TMBhelper/json (API)
# Install 'TMBhelper' in R: |
install.packages('TMBhelper', repos = c('https://noaa-fims.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kaskr/tmb_contrib_r/issues
Last updated 3 years agofrom:d275e5226d. Checks:OK: 1 ERROR: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 11 2024 |
R-4.5-win | ERROR | Nov 11 2024 |
R-4.5-linux | ERROR | Nov 11 2024 |
R-4.4-win | ERROR | Nov 11 2024 |
R-4.4-mac | ERROR | Nov 11 2024 |
R-4.3-win | ERROR | Nov 11 2024 |
R-4.3-mac | ERROR | Nov 11 2024 |
Exports:check_estimabilityCheck_Identifiablefit_tmboneStepPredict_deltaModelOptimizesample_reTMBAIC
Dependencies:abindbackportsBHcallrcheckmateclicolorspacedescdistributionalfansifarvergenericsggplot2gluegridExtragtableinlineisobandlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgbuildpkgconfigposteriorprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanscalesStanHeaderstensorAtibbleTMBtmbstanutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Check for identifiability of fixed effects | check_estimability |
Copy of check_estimability | Check_Identifiable |
Extract fixed effects | extract_fixed |
Optimize a TMB model | fit_tmb |
Calculate one-step-ahead (OSA) residuals for a mixed-effects delta-model. | oneStepPredict_deltaModel |
Copy of fit_tmb | Optimize |
Sample random effects to correct for re-transformation bias | sample_re |
Calculate marginal AIC for a fitted model | TMBAIC |